The best mini chocolate cheesecakes that only take 30 minutes to prep and bake in a muffin pan! These easy chocolate cheesecakes can be made with a graham cracker crust or oreo crust. Top chocolate cheesecake cupcakes with any flavor whipped cream or a scoop of chocolate ganache.

mini chocolate cheesecake with whipped cream and strawberry on metal plate
Everyone needs a classic chocolate cheesecake recipe that will feed a crowd, don’t you think?

Tools to Make Mini Cheesecakes in a Cupcake Pan

  • standard size muffin pan
  • paper muffin / cupcake liners

Making individual cheesecakes in a muffin pan is a great way to scale down a regular cheesecake recipe. Mini cheesecakes don’t require a water bath or any special tools, plus they bake faster than regular cheesecake.

Easy Chocolate Cheesecake Ingredients

Our recipe for chocolate cheesecake cupcakes only calls for 5 ingredients!

  • cream cheese: use two 8 oz packages. Be sure to use full fat, not low fat, cream cheese for best results.
  • sugar: helps to balance the tanginess of the cream cheese.
  • vanilla extract: just a teaspoon, but it enhances the classic cheesecake flavor.
  • eggs: eggs are the last ingredient that get mixed into the cheesecake batter. Be sure to mix them in, one at a time, just until the yolk breaks. Over beating the eggs is the number one cause of air bubbles and cracking.
  • semi-sweet chocolate chips, melted: I kept it very basic because I always have chocolate chips in my pantry but I don’t always have chocolate baking bars. Really any kind of chocolate will work.

mini chocolate cheesecakes stacked 3 high on white background

How to Make Mini Cheesecakes in a Muffin Pan

  1. Line the muffin pan with paper liners.
  2. Place about 2 tbsp of the crust in the bottom of each liner. Use the bottom of a measuring cup to pack the crust down.
  3. Pre-bake the crust for 5 minutes.
  4. Mix the cheesecake batter ingredients together.
  5. Divide the cheesecake batter evenly among the muffin liners.
  6. Bake until the center of the cheesecake only slightly jiggles when you shake the muffin pan.

How Long Does it Take to Make Chocolate Cheesecakes?

  • 5 minutes to prep the crust
  • 5 minutes to pre-bake the crust
  • 5 minutes to prep the cheesecake
  • 20 ish minutes to bake cheesecake
  • at least 4 hours to refrigerate the cheesecake before serving. I prefer to refrigerate mine overnight. Waiting is the hardest part, right?!

how to make mini cheesecakes in muffin pan collage

How to Tell When Mini Cheesecakes are Done Baking?

The best way to tell when the mini cheesecakes are done is the jiggle test. The center of the cheesecake should jiggle slightly when you shake the pan and the edges of the cheesecake will be slightly more puffy or airy.

How to Cool Mini Cheesecakes

Once the cheesecakes are done baking, remove the pan from the oven and place it on the counter until the cheesecakes have cooled to room temperature. Then loosely cover the muffin pan with plastic wrap and place in the fridge overnight to chill.

Why Did my Mini Cheesecakes Sink?

Over beating the eggs is the number one cause of air bubbles in cheesecake. Air bubbles cause the cheesecakes to sink in the middle as they cool. Be sure to mix the eggs in, one at a time, just until the yolk breaks. Once all the eggs have been added to the cheesecake batter, beat for only 30-60 seconds, until the eggs are fully incorporated.

mini chocolate cheesecake topped with whipped cream and chocolate chips on metal plate

Tips for Making Easy Mini Cheesecakes

  • Allow the cream cheese to come to room temperature before beating it. Room temperature cream cheese is easier to whip.
  • The eggs are the last ingredient that get mixed into the cheesecake batter. Be sure to mix them in, one at a time, just until the yolk breaks. Over beating the eggs is the number one cause of air bubbles and cracking.
  • Thoroughly chill the individual chocolate cheesecakes in the fridge before serving.

How to Top Mini Cheesecakes

You can top these chocolate cheesecakes with oreo crust with..

How to Freeze Mini Cheesecakes?

  • Cool the cheesecakes completely before freezing.
  • Place the mini cheesecakes, without any garnishes, on a baking sheet, uncovered, and place in the freezer until frozen.
  • Once frozen, wrap each cheesecake in aluminum foil and place them inside a ziplock bag in the freezer. They can be frozen for 4 months. To thaw, place them in the refrigerator overnight.
  • Before serving add your desired toppings.
 

mini chocolate cheesecake with bite on white background

More Chocolate Desserts

Double Chocolate Chip M&M Cookies
Chocolate Velvet Cake
Healthier Chocolate Cake
Doctored Up Chocolate Cake Mix


Subscribe to The First Year newsletter to get our recipes sent to your inbox! Follow along on Instagram, Facebook, Pinterest, and Youtube. If you make this recipe, tag @beth_thefirstyear on instagram!


These are the BEST mini chocolate cheesecakes! 15 minutes to bake and you can add any toppings you want. Learn our tricks for making perfect chocolate cheesecakes.

Mini Chocolate Cheesecakes

Yield: 12 mini cheesecakes
Prep Time: 15 minutes
Cook Time: 20 minutes
Additional Time: 4 hours
Total Time: 4 hours 35 minutes

The best mini chocolate cheesecakes that only take 30 minutes to prep and bake in a muffin pan! These easy chocolate cheesecakes can be made with a graham cracker crust or oreo crust. Top chocolate cheesecake cupcakes with any flavor whipped cream or a scoop of chocolate ganache.

Ingredients

Crust

  • 1 & 1/2 cup graham cracker crumbs
  • 4 tbsp unsalted butter, melted

Cheesecake

  • 2 (8 oz) packages full fat cream cheese, room temperature
  • 1/4 cup sugar
  • 1 tsp vanilla extract
  • 2 eggs, added one at a time
  • 3/4 cup semi-sweet chocolate chips, melted

Instructions

Crust

  1. Preheat the oven to 350º F.
  2. Line a regular sized muffin pan with 12 muffin liners.
  3. In a mixing bowl, combine the graham cracker crumbs and melted butter until it resembles coarse sand.
  4. Put 1 tbsp plus 1 tsp of graham cracker crumbs in each muffin cup.
  5. Use a 1/3 cup (or similar) to press the crumbs down firmly into the pan.
  6. Bake the crust for 5 minutes. Remove the pan from the oven and allow it to cool while prepping the cheesecake.

Cheesecake

  1. In a mixing bowl, beat the cream cheese with an electric mixer until smooth, 2-3 minutes.
  2. Beat in the sugar and vanilla extract until smooth.
  3. Beat in the melted chocolate.
  4. Beat in the eggs, one at a time.
  5. Place a little more than 2 tbsp of cheesecake batter in each muffin cup.
  6. Bake for 15-17 minutes or until the center of the cheesecake is only slightly jiggly.
  7. Allow the cheesecakes to cool to room temperature then place them in the fridge for at least 2 hours to chill before serving. If refrigerating overnight, loosely cover the cheesecakes in plastic wrap. You can serve them without any additional toppings or you can add cool whip, strawberries, chocolate chips, chocolate ganache, strawberry puree, whatever you want!