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Apple muffins go wrong in two ways: the apples sink, or the chunks are too big to bite through. I spent 6 months testing muffin recipes for my Bakery Style Muffins Cookbook, and these apple cinnamon muffins fix both. A thick buttermilk batter holds every ½ inch apple chunk in place and bakes up tall, domed tops. Buttermilk keeps the crumb tender, and oil keeps it moist for days.

I was so afraid of baking with apples thinking it would not bake fully, but these baked amazing! I forgot the vanilla extract but it didn’t make it any less delicious! I used granny smith apples.
-Mariah

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While testing this recipe I took every element into account, even down to getting the apple pieces to just the right size (not too big or too small). I extensively test my recipes so I can provide easy-to-follow steps that take out all the guesswork and make even a novice baker successful the first time.

Keep reading, because you’re going to learn how to make domed muffin tops that will seriously impress your family and friends, get all my best muffin tips, and more!

apple cinnamon muffin on a wood platter surrounded by a cinnamon stick and apple slices

Why You’ll Love This Cinnamon Apple Muffin Recipe

I spent 6 months testing muffin recipes for my Bakery Style Muffins Cookbook. That’s where I learned what makes a muffin bake up tall, tender, and moist. These apple cinnamon muffins use all of it.

The biggest thing I tested here was apple size. Chunks that are too big feel awkward in the muffin. Half inch pieces turned out to be the right balance: you still see and taste the apple, but every bite works. If you prefer smaller pieces, chop them smaller.

Like most of my muffin recipes, these use oil and buttermilk. Oil stays liquid at room temperature, so the muffins stay soft for days instead of firming up like butter muffins. Buttermilk is thicker than regular milk, so the batter is thicker too, and thick batter holds its shape for taller tops. Its acid also weakens gluten, which keeps the crumb tender even if you stir a little too much.

I use both granulated and brown sugar here. Brown sugar adds a caramel, molasses flavor that’s perfect in warm fall muffins. And the buttermilk’s slight tang cuts through the sugar, so the muffins taste richer without tasting sweeter. Put it all together and you get a tall, tender apple cinnamon muffin with fruit in every bite that stays moist for days.

If apple season has you in a baking mood, try my pumpkin muffins next. Same thick batter, same tall tops, all fall flavor.

a white bowl filled with diced apples beside three apples, a green apple, large red apple and small red and yellowish apple

Apple Muffins Recipe Ingredients

These muffins have the perfect balance of cinnamon flavor, sweetness and tartness. Keep scrolling to get the full measurements in the recipe card below.

  • All purpose flour
  • Granulated sugar
  • Brown sugar
  • Cinnamon
  • Baking powder
  • Salt
  • Eggs
  • Buttermilk
  • Vegetable oil
  • Vanilla extract
  • Diced apples: You can use any kind of apples you like. Fresh apples, especially during apple season, are best! Even better if you can go apple picking and use fresh picked apples!

Cinnamon Sugar Topping Ingredients

  • Unsalted butter
  • Cinnamon
  • Granulated sugar
a partially eaten apple cinnamon muffin sitting inside its muffin paper surrounded by cinnamon sticks and green apple slices

How to Properly Measure Flour

The most accurate way to measure flour is to use a kitchen scale, weighing it in grams. If you don’t have a kitchen scale, follow this method. 

  • Aerate the flour with a whisk or spoon. Flour becomes heavy and compact as it sits. Aerating is the same as fluffing the flour, but not the same as sifting it. Do not sift the flour unless the recipe specifically calls for it.
  • Use a spoon to sprinkle the flour into the measuring cup. Do not tap the cup against the counter, as this will compact the flour.
  • Use the back of a butter knife to level off the excess. You’ll need to repeat the aerating process after filling each cup.

How to Make Apple Cinnamon Muffins

These easy apple cinnamon muffins only take 15 minutes of prep time. Find the full instructions in the recipe card below.

  1. Prep apples. Dice about 1 & ½ apples into ½ inch chunks. Set aside. 
  2. Mix dry ingredients. In a medium bowl combine the flour, granulated sugar, brown sugar, cinnamon, baking powder, and salt. Stir with a spoon to combine and set aside.
  3. Mix wet ingredients. In a large mixing bowl combine the eggs, buttermilk, vegetable oil, and vanilla extract. Stir to combine with a fork or spatula.
  4. Combine wet and dry ingredients. Gradually mix in the dry ingredients and the apple chunks, mixing just until combined. The batter will be very thick!
  5. Allow batter to rest. Cover the bowl with a towel and allow the batter to rest for 15 minutes. During this time, preheat the oven to 425ºF.
  6. Add muffin batter to muffin tin liners. For bakery style muffin tops, line a 12 count muffin pan with 6 muffins liners, meaning you’ll only fill every other muffin well with batter. Filling every other well allows the muffins to spread and dome without running into each other. Fill the liners to the top with batter. Yes – to the top! Use a butter knife to smooth the tops of the muffins if lumpy. 
  7. Bake. Bake for 7 minutes at 425ºF, then keep the muffins in the oven, and turn the temperature down to 350ºF and bake for 16-21 minutes or until a toothpick inserted in the center comes out clean and your muffins are golden brown. Allow the muffins to cool in the pan for 15 minutes before removing. Repeat with the remaining batter, making sure to bump the temperature back up to 425ºF.
  8. Assemble cooled muffins. Once the muffins are cool, assemble the cinnamon sugar topping. Melt 2 tablespoons of butter. Use a pastry brush to brush the melted butter on top of the muffins. Roll the top of each muffin in a bowl of cinnamon sugar. 

Apple Cinnamon Muffin Recipe Tips

A few small choices make a big difference in apple muffins. Here’s what I learned while testing this recipe.

  • Peel the apples. Peel them first, then dice. Peeled apples bake up soft and tender, with no chewy skin in the middle of your muffin.
  • Dice them ½ inch. That size gives you visible apple in every bite without awkward, oversized chunks. Go smaller if you like.
  • Skip the flour toss. You don’t need to coat the apples in flour, because this batter is thick enough to hold them in place. As the batter heats in the oven, it loosens before it sets. A loose batter gives fruit time to sink, but a thick batter sets fast, especially with the hot starting temperature. If your fruit sinks, fix the batter, not the fruit.
  • Don’t overmix. Stir just until the flour disappears, then fold in the apples with as few strokes as possible. The buttermilk gives you some insurance, but a light hand still makes the most tender muffin.
a muffin pan full of apple cinnamon muffins, red and green apple slices, half apples and whole apples, surrounded by cinnamon sticks and more apples

How to Create Bakery Style Muffins

Bakery style muffins are known for their domed tops. Plus who doesn’t love them? I used a few techniques to help “lift” these muffins so they would have large, domed tops!

1. The Rest Period

Let the batter rest for 15 minutes after it’s mixed and before you scoop it into the muffin pan. During the resting period, starch molecules in the flour are absorbing the liquid in the batter, causing them to swell and giving the batter a thicker consistency (ref the kitchen whisper). Our 15 minute rest is just a quick rest. 

2. Fill Every Other Muffin Cup

This tip has been a game changer! For bakery style muffin tops, line a 12 count muffin pan with 6 muffin liners, meaning you’ll only fill every other muffin well with batter. Filling every other cup allows the muffins to spread and dome without running into each other. This technique also encourages the muffins to brown, creating a golden muffin top.

3. Fill Them To The Top

Fill your muffin liners to the top with batter. Yes, this goes against everything you’re heard but it’s important in helping the muffin gain that height.

4. Bake at High Temperature Initially

Bake the muffins at a high temperature (425ºF) initially, then lower to 350ºF. Starting the muffins off at a higher temperature causes the batter to rise rapidly, setting the outer surface of the muffin, producing a dome shape.

apple cinnamon muffins on a wood platter surrounded by a cinnamon stick, green apple slices, and more apples and muffins in the background

Apple Cinnamon Muffin Recipe Variations

  • Add Ins: Add other ingredients you love, like walnuts, raisins, and more! 
  • Apple Bread: Put your muffin batter in a bread pan instead of muffin cups! Adjust cooking time as needed.

Gluten Free Apple Cinnamon Muffins

 Use a 1:1 gluten-free baking flour blend in place of all-purpose flour. I used King Arthur’s Measure for Measure Gluten Free Flour with great results.

How to Store Apple Cinnamon Muffins

If you’ll be eating the muffins within 24 hours of baking, you can leave them uncovered on the counter. The muffins will not dry out while left at room temperature for 1 day. 

In fact, muffins are so moist they can become soggy and those crunchy, sugary tops can disappear when stored in an airtight container.

But I have a trick to help that – paper towels. 

For longer storage, 2-4 days, line the bottom of an airtight container with paper towels. Place the muffins in a single layer in the container then cover the muffins with any additional layer of paper towels. The paper towels will act like a sponge, absorbing the moisture they release while they are stored. 

If the paper towels become too moist around day 2 or day 3, replace them with fresh paper towels. 

How To Freeze Muffins

Individually wrap each muffin in plastic wrap. Then place them in a ziploc bag or airtight container and place in the freezer for up to 3 months.

To thaw, leave them at room temperature until defrosted, about 1 hour. Or unwrap them and microwave at 20 second intervals until defrosted.

a pile of apple cinnamon muffins topped with cinnamon sugar with red and green apples in the background

These were really good. They stay moist quite a few days. I used a cup of full fat buttermilk in stead of 3/4. Letting the batter sit first activates the leavening. My husband says this one’s a keeper.

-Lori

Apple Cinnamon Muffins FAQs

What apples are best for baking muffins?

Granny Smith apples are the best apples for muffins because they have a great balance of sweetness with tartness. The tartness helps tone down the sweetness muffins tend to have. You can definitely use other apples, like gala apples or pink lady apples, but you’ll have a different flavor and consistency from each type.

Can I use applesauce or shredded apple instead of apple chunks?

You can swap in shredded apple using the same amount, 2 cups. You’ll lose the visible apple pieces, but you’ll get apple flavor all through the muffin. If you want applesauce, use my applesauce muffins recipe instead. It’s built around applesauce from the start.

Can I use regular milk instead of buttermilk?

I don’t recommend it. Regular milk is thinner, so the batter loosens up, the muffins don’t dome as high, and the apples are more likely to sink. You also lose the acid that keeps the crumb tender and the tang that balances the sweetness. No buttermilk on hand? Make your own with my DIY buttermilk recipe in 5 minutes.

More Muffin Recipes

5 from 27 ratings

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Moist Apple Cinnamon Muffin Recipe

By: Beth
Prep Time: 15 minutes
Cook Time: 16 minutes
Rest Time: 15 minutes
Servings: 10 muffins
Tall, domed apple cinnamon muffins with tender apple chunks and a crunchy cinnamon sugar top. Buttermilk and oil keep them soft and moist for days.

Video

Ingredients

  • 3 cups (360g) all purpose flour
  • 1 cup (198g) granulated sugar
  • ½ cup (107g) brown sugar
  • 2 tsp cinnamon
  • 2 tsp baking powder
  • ½ tsp salt
  • 2 large eggs
  • ¾ cup (170g) buttermilk
  • ½ cup (100g) vegetable oil
  • 2 tsp vanilla extract
  • 2 cups diced apples, cut into 1/2 inch chunks

Cinnamon Sugar Topping

  • 2 Tbsp (29g) unsalted butter, melted
  • ½ Tbsp cinnamon
  • 2 Tbsp granulated sugar

Instructions 

  • Peel and dice about 1 ½ apples into ½ inch chunks. You want 2 cups diced apples. Set aside.
  • In a mixing bowl combine the flour, granulated sugar, brown sugar, cinnamon, baking powder, and salt. Stir with a spoon to combine and set aside.
    3 cups (360g) all purpose flour, 1 cup (198g) granulated sugar, 1/2 cup (107g) brown sugar, 2 tsp cinnamon, 2 tsp baking powder, ½ tsp salt
  • In a larger mixing bowl combine the eggs, buttermilk, vegetable oil, and vanilla extract. Stir to combine with a fork or spatula.
    2 large eggs, ¾ cup (170g) buttermilk, ½ cup (100g) vegetable oil, 2 tsp vanilla extract
  • Gradually mix in the dry ingredients and the apple chunks, mixing just until combined. The batter will be very thick!
    2 cups diced apples
  • Cover the bowl with a towel and allow the batter to rest for 15 minutes. During this time, preheat the oven to 425ºF.
  • For bakery style muffin tops, line a 12 count muffin pan with 6 muffins liners, meaning you’ll only fill every other muffin well with batter. Filling every other well allows the muffins to spread and dome without running into each other. Fill the liners to the top with batter. Yes – to the top! Use a butter knife to smooth the tops of the muffins if lumpy.
  • Bake for 7 minutes at 425ºF, then keep the muffins in the oven, and turn the temperature down to 350ºF and bake for 16-21 minutes or until a toothpick inserted in the center comes out clean. Allow the muffins to cool in the pan for 15 minutes before removing. Repeat with the remaining batter, making sure to bump the temperature back up to 425ºF.
  • Once the muffins are cool, assemble the cinnamon sugar topping. Melt 2 tablespoons of butter. Use a pastry brush to brush the melted butter on top of the muffins. Roll the top of each muffin in a bowl of cinnamon sugar.
    2 Tbsp (29g) unsalted butter, 1/2 Tbsp cinnamon, 2 Tbsp granulated sugar

Last Step: I’d love to hear what you think. Leave a rating and comment here.

Notes

Gluten-Free: Use a 1:1 gluten-free baking flour blend in place of all-purpose flour. I used King Arthur’s Measure for Measure Gluten Free Flour with great results.
To Store: Leave muffins uncovered on the counter for up to 24 hours. For 2 to 4 days, store in an airtight container lined with paper towels, with another layer of paper towels on top. Swap in fresh paper towels if they get damp.
To Make Ahead: This batter can be made ahead of time. Cover and refrigerate it for up to 24 hours, then scoop straight from cold and bake as directed. You may need to add a couple extra minutes to the bake time since the batter is starting out cold.
To Freeze: Wrap each cooled muffin individually in plastic wrap, then place in a zip top bag or airtight container. Freeze for up to 3 months. Thaw on the counter for about 1 hour, or unwrap and microwave in 20 second intervals.

Nutrition

Calories: 424kcal | Carbohydrates: 67g | Protein: 6g | Fat: 15g | Saturated Fat: 4g | Polyunsaturated Fat: 7g | Monounsaturated Fat: 4g | Trans Fat: 0.2g | Cholesterol: 45mg | Sodium: 239mg | Potassium: 126mg | Fiber: 2g | Sugar: 37g | Vitamin A: 170IU | Vitamin C: 1mg | Calcium: 99mg | Iron: 2mg

Nutrition Disclosure

All nutritional values are approximate and provided to the reader as a courtesy. Changing ingredients and/or quantities will alter the estimated nutritional calculations.

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About Beth

I believe that everyone should have a go-to dessert to bring to parties! With hundreds of recipes, I'll help you find yours!

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50 Comments

  1. 5 stars
    These were really good. They stay moist quite a few days. I used a cup of full fat buttermilk in stead of 3/4. Letting the batter sit first activates the leavening. My husband says this one’s a keeper.

    1. Buttermilk is a secret weapon in muffin recipes—it adds moisture, tenderness, and helps create that signature tall dome. Its acidity breaks down gluten for a softer crumb and reacts with leaveners to boost rise. It also adds a subtle tang that balances sweetness and enhances flavor. If you want muffins that are moist, fluffy, and full of bakery-style magic, don’t skip the buttermilk. I have a tutorial on homemade buttermilk.

  2. 5 stars
    I’ve made many of your bakery muffins and I’ve loved each one . Today I’m making apple muffins , but I’m trying it out with bread. Keep fingers crossed 👨🏼‍🍳😃

    1. Hi Nadine! Powdered Sugar Glaze (about ½ cup)

      1 cup (120g) powdered sugar
      2 to 3 Tbsp milk
      ¼ tsp vanilla extract
      Pinch of salt (optional)
      Whisk the powdered sugar, vanilla and salt with 2 Tbsp milk until smooth.
      Add more milk ½ tsp at a time until it’s pourable but still coats a spoon.
      Drizzle over cooled bakes so it doesn’t melt and run off.

      Too thin? Whisk in more powdered sugar. Too thick? Add a few drops of milk.

  3. 5 stars
    Instant hit at our house! Subbed eggs for greek yogurt to accommodate an egg allergy and still came out really delicious, will make again. Perfect fall time taste